In the courses that I have been taking in Autism and Behvioural Science the actual cause or causes of Autism are unclear however genetics does appear to play a role. In this Ted Talks, Dr. Wendy Chung, provides insightful background as to some possible causes of Autism, what is known and what clearly is not known.
Enjoy this informative Ted Talks.
http://www.ted.com/talks/wendy_chung_autism_what_we_know_and_what_we_don_t_know_yet
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